- Apply LUTs to your images easily and correctly, in 16-bit. Drag-and-drop images to see the LUT applied instantly, or even see your LUT applied to video in real-time. You can even preview on DPX files and other production image formats.View your 3D LUT using tetrahedral interpolation and your 1D LUT with linear interpolation.
- Polarr is the easiest app to create your own aesthetics and share with others. Easily customize your own style with selective colors, overlays. Generate QR and short codes to share styles with others. Segment your photo with A.I. To easily make complex edits. Upload your own overlays to push the boundaries of your styles. Included effects:. Selective objects: Sky, Person.
- Blackmagic RAW Q5 and 8:1 are extremely high quality making them great for episodic television and independent films. Blackmagic RAW quality is so high, you can even use 12:1 and 18:1 settings for incredibly small files that are suitable for all kinds of uses such as broadcast news, live sport events, digital signage, A/V, corporate video.
- Lattice Lut Editor And Viewer 1 8 11
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The bioinfomatics software on Bio-Linux consists of the packages below, which includes our own packages as well as bioinformatics packages from the main Debian and Ubuntu repositories. This list was last updated in September 2015 and new and updated packages may have been added since then.
Most of these packages work from the command line, so just type the name of the program to run it, or for R packages activate them using the “library(…)” function. To get more info on a package type “dpkg -s packagename” or to see the local docs for a package type “go /usr/share/doc/packagename“. GUI applications can be located through the Installed Applications section of the main Dash menu (the button in the top left corner of the screen).
Package Summary; 2048-cli-0.9.1+git.20181118-1.8.i586.rpm: A CLI version of the '2048' game: 2048-cli-0.9.1+git.20181118-1.8.x8664.rpm: A CLI version of the '2048' game. Lattice Technology: Manufacturing Software Now Has 3D Viewer That Supports Firefox. Lattice Technology Inc., maker of technical communication and digital mock up software for the manufacturing enterprise, released the latest version of XVL Player and XVL Player Pro.
Package | Version | Description |
---|---|---|
abyss | 1.9.0 | de novo, parallel, sequence assembler for short reads |
ampliconnoise | 1.29 | Programs for the removal of noise from 454 sequenced PCR amplicons |
arb | 5.5 | No description |
archaeopteryx | 0.972.beta9M | A phylogenetic tree viewer and editor |
artemis | 16.0.0 | Free genome viewer and annotation tool |
assembly-conversion-tools | 0.01 | Conversion tools for handling 454 assemblies. |
axiome | 1.7biolinux1 | QIIME and mothur automation toolkit |
axiome-dev | 1.7biolinux1 | QIIME automation toolkit — Plugin Development |
backups | 0.3 | Bio-Linux 5/6/7 backup utilities. |
bamtools | 2.4.0+dfsg | toolkit for manipulating BAM (genome alignment) files |
beam2 | 0.1+20101008 | SNP-SNP interaction association mapping based on SNP-block models |
bedtools | 2.17.0 | suite of utilities for comparing genomic features |
berkeley-express | 1.5.1 | Streaming quantification for high-throughput sequencing |
big-blast | 1.0.3 | The big-blast script for annotation of long sequences |
biocode | 2.3.3 | Biocode plugin for Geneious workbench |
bioperl | 1.6.923 | Perl tools for computational molecular biology |
bioperl-run | 1.6.9 | BioPerl wrappers: scripts |
biosquid | 1.9g+cvs20050121 | utilities for biological sequence analysis |
bitseq | 0.7.0 | Bayesian Inference of Transcripts from Sequencing Data |
blast2 | 1:2.2.26.20120620 | Basic Local Alignment Search Tool |
bldp-files | 1.1 | Documentation for bioinformatics software on Bio-Linux. |
blimps-utils | 3.9 | blocks database improved searcher |
blixem | 3.1.1 | Interactive browser for viewing pairwise Blast results. |
bowtie | 1.1.1 | Ultrafast memory-efficient short read aligner |
bowtie2 | 2.2.6 | ultrafast memory-efficient short read aligner |
bowtie2-debug | 2.2.6 | ultrafast memory-efficient short read aligner |
bwa | 0.7.12 | Burrows-Wheeler Aligner |
cap3 | 20080520 | A base calling system |
catchall | 3.0.1 | Analyze data about microbial species abundance |
cd-hit | 2009-1020 | a suite of programs designed to quickly group sequences |
cdbfasta | 20100722 | Constant DataBase indexing and retrieval tools for multi-FASTA files |
chimeraslayer | 20101212+dfsg | detects likely chimeras in PCR amplified DNA |
clcsequenceviewer | 6.4 | CLC Free Sequence Viewer |
clearcut | 1.0.9 | Relaxed Neighbor Joining |
clustalw | 2.1+lgpl | No description |
clustalx | 2.1+lgpl | No description |
cortex-con | 0.05 | efficient and low-memory software for consensus genome assembly |
cruft-killer | 0.3 | Remove cruft from Bio-Linux desktop |
cufflinks | 2.2.1 | Transcript assembly, differential expression and regulation for RNA-Seq |
cytoscape | 1:3.2.1 | Platform for visualizing complex-networks and integrating these with attribute data |
dendroscope | 1.4.0 | Interactive viewer for large phylogenetic trees. |
dialign | 2.2.1 | Segment-based multiple sequence alignment |
dotter | 3.1 | Graphical dotplot program for detailed comparison of two sequences |
ea-utils | 1.1.2+dfsg | command-line tools for processing biological sequencing data |
embassy-domainatrix | 0.1.650 | Extra EMBOSS commands to handle domain classification file |
embassy-domalign | 0.1.650 | Extra EMBOSS commands for protein domain alignment |
embassy-domsearch | 1:0.1.650 | Extra EMBOSS commands to search for protein domains |
embassy-phylip | 3.69.650 | No description |
emboss | 6.6.0+dfsg | european molecular biology open software suite |
emboss-lib | 6.6.0+dfsg | EMBOSS Libraries |
estscan2 | 2.1 | detects coding regions of DNA sequences |
exchanger | 1.0 | lets you store, annotate and share files via an omixed server |
fasta | 36t2d5 | Collection of programs for searching DNA and protein databases. |
fastdnaml | 1.2.2 | Tool for construction of phylogenetic trees of DNA sequences |
fastqc | 0.11.3 | A quality control application for high throughput sequence data |
fasttree | 2.1.7 | phylogenetic trees from alignments of nucleotide or protein sequences |
fastx-toolkit | 0.0.14 | FASTQ/A short nucleotide reads pre-processing tools |
fixups | 8.0 | Miscellanous fixups for Bio-Linux |
fraggenescan | 1.19 | finds (fragmented) genes in short reads |
galaxy-server | 1.bl.py27.20140730 | Web-based analysis environment for bioinformatics |
galaxy-server-apache-proxy | 1.bl.py27.20140730 | Activates Apache2 proxy for Galaxy server, and PAM authentication |
galaxy-server-pg-database | 1.bl.py27.20140730 | Activates PostgreSQL database back-end for Galaxy |
galaxy-tools-bl | 1:0.5.1 | Standard set of tool wrappers for Galaxy server |
gap2caf | 0.20100408 | Handles conversion of gap format assemblies to caf format. |
geneious | 5.5.7 | Geneious Basic workbench from Biomatters |
geneious-genbanksubmit | 1.3.0 | GenBank submission for Geneious workbench |
genquery | 2.2.4 | GenQuery is a set of Perl libraries for managing SQL query templates and making web-based query forms. |
glam2 | 1:4.10.0.1 | gapped protein motifs from unaligned sequences |
glimmer3 | 3.02 | Gene detection in archea and bacteria |
gnx-tools | 0.1+20120305 | Basic genome assembly statistic tool to calculate Nx values e.g. N50,N10,NG50 |
handlebar | 2.2.2 | Handlebar is a database for storing data about barcodes and acessing the data via a web front-end. |
happy | 1.2 | Multipoint QTL Mapping in Genetically Heterogeneous Animals |
hmmer | 3.1b1 | profile hidden Markov models for protein sequence analysis |
hyphy | 2.1+20111219 | analysis of genetic sequences using multiple techniques |
infernal | 1.1.1 | inference of RNA secondary structural alignments |
isacreator | 1.6.0 | GUI to import and edit ISA dataset descriptions. |
jaligner | 1.0+dfsg | Smith-Waterman algorithm with Gotoh’s improvement |
jalview | 2.8.0b1.dfsg | multiple alignment editor |
jellyfish | 2.2.3 | count k-mers in DNA sequences |
jemboss | 6.6.0+dfsg | graphical user interface to EMBOSS |
jmotu | 1.0.6 | Clusters barcode DNA sequence data into molecular operational taxonomic units |
jprofilegrid | 2.0.5 | Multiple sequence alignment tool that generates ProfileGrids |
keyring | 6 | Public key package for the Bio-Linux package repository |
khmer | 1.1 | k-mer counting, filtering and graph traversal |
khmer-example | 1.1 | k-mer counting, filtering and graph traversal |
last-align | 393 | genome-scale comparison of biological sequences |
lastz | 1.02.00 | Aligns two DNA sequences, inferring appropriate parameters automatically |
libbiojava-java | 1:1.7.1 | Java API to biological data and applications (default version) |
libbiojava-java-demos | 1:1.7.1 | Example programs for BioJava |
libpandaseq-sam1 | 1.2~ppa0 | Pair-end read assembler |
libpandaseq-url0 | 2.7~ppa0 | Pair-end read assembler — URL handler |
libpandaseq5 | 2.7~ppa0 | Pair-end read assembler |
lucy | 1.19p | Preparation of raw DNA sequence fragments for sequence assembly |
macs14 | 1.4.2.1 | Model-based Analysis of ChIP-Seq on short reads sequencers |
mafft | 7.215 | Multiple alignment program for amino acid or nucleotide sequences |
maq | 0.7.1 | maps short fixed-length polymorphic DNA sequence reads to reference sequences |
maxd | 2.3.0 | maxd is a data warehouse and visualisation environment for genomic expression data. |
mdust | 1:0.1+20020708 | repetitive sequence masker |
meme | 1:4.10.0.1 | search for common motifs in DNA or protein sequences |
mesquite | 2.74 | Software for evolutionary biology. |
metavelvet | 1.2.02 | extension of Velvet assembler to de novo metagenomic assembly |
microbiomeutil | 20101212+dfsg | Microbiome Analysis Utilities |
mira-3rdparty | 20120706 | Additional useful tools to accomapany the MIRA assembler |
mira-assembler | 4.9.5 | Whole Genome Shotgun and EST Sequence Assembler |
mothur | 1.36.1+dfsg | sequence analysis suite for research on microbiota |
mothur-lookup-files | 1 | .pat lookup files for Mothur |
mothur-mpi | 1.36.1+dfsg | mpi-enabled binary for mothur |
mrbayes-mpi | 3.2.2+dfsg | Bayesian Inference of Phylogeny – mpi version |
msatfinder | 2.0.10 | Microsatellite Finder |
mspcrunch | 2.5 | a BLAST post-processing filter. |
mummer | 3.23~dfsg | Efficient sequence alignment of full genomes |
muscle | 1:3.8.31 | Multiple alignment program of protein sequences |
mview | 1.51 | Multiple alignment viewer for sequence database search results. |
natefoo-add-scores | 0.1+20101006 | small helper application used by Galaxy server |
natefoo-taxonomy | 0.1+20101102 | small taxonomy applications used by Galaxy server |
ncbi-blast+ | 2.2.28 | next generation suite of BLAST sequence search tools |
ncbi-blast+-legacy | 2.2.28 | NCBI Blast legacy call script |
ncbi-seg | 0.0.20000620 | tool to mask segments of low compositional complexity in amino acid sequences |
ncbi-tools-bin | 6.1.20120620 | NCBI libraries for biology applications (text-based utilities) |
ncbi-tools-x11 | 6.1.20120620 | NCBI libraries for biology applications (X-based utilities) |
njplot | 2.4 | phylogenetic tree drawing program |
nrdb | 2 | Generates quasi-nonredundant protein and nucleotide sequence databases |
ocount | 0.5 | Oligonucleotide frequency counter |
oligoarray | 2.1 | Computes oligonucleotides for microarray construction |
oligoarrayaux | 3.7 | Free software that is required for the OligoArray2.1 software. |
omegamap | 0.5 | Detects natural selection and recombination in DNA or RNA sequences. |
paml | 4.7 | Phylogenetic Analysis by Maximum Likelihood (PAML) |
pandaseq | 2.7~ppa0 | Pair-end read assembler |
pandaseq-dev | 2.7~ppa0 | Pair-end read assembler — Development tools |
pandaseq-sam | 1.2~ppa0 | Pair-end read assembler |
pandaseq-sam-dev | 1.2~ppa0 | Pair-end read assembler — Development tools |
parafly | 0.0.2013.01.21 | parallel command processing using OpenMP |
parsinsert | 1.04 | Parsimonious Insertion of unclassified sequences into phylogenetic trees |
pass2 | 0.1+20101008 | Peak calling in ChIP data based on Poisson de-clumping |
perm | 0.4.0 | Efficient mapping of short reads with periodic spaced seeds |
pfaat | 1.0.034 | Sequence alignment editor designed for protein family analysis. |
phylip | 1:3.695 | No description |
phyml | 2:20120412 | Phylogenetic estimation using Maximum Likelihood |
picard-tools | 1.105 | Command line tools to manipulate SAM and BAM files |
plymouth-theme | 8.2 | Boot splash for Bio-Linux 8 |
prank | 0.0.140110 | Probabilistic Alignment Kit for DNA, codon and amino-acid sequences |
predictprotein | 1.0.94 | suite of protein sequence analysis tools |
priam | 2005.07 | Generate enzyme-specific profiles for metabolic pathyway prediction |
primer3 | 2.3.6 | Tool to design flanking oligo nucleotides for DNA amplification |
probcons | 1.12 | PROBabilistic CONSistency-based multiple sequence alignment |
pymol | 1.7.2.1 | Molecular Graphics System |
qiime | 1.9.1+dfsg | Quantitative Insights Into Microbial Ecology |
qiime-default-reference | 0.1.3 | QIIME default reference dataset |
qtlcart | 1.17f | Map quantitative traits using a map of molecular markers. |
r-base | 3.2.2 | GNU R statistical computation and graphics system |
r-base-core | 3.2.2 | GNU R core of statistical computation and graphics system |
r-base-dev | 3.2.2 | GNU R installation of auxiliary GNU R packages |
r-bioc-affy | 1.46.1 | GNU R package “Methods for Affymetrix Oligonucleotide |
r-bioc-affyio | 1.36.0 | GNU R package “Tools for parsing Affymetrix data files” |
r-bioc-annotate | 1.42.0 | GNU R package “Annotation for microarrays” |
r-bioc-annotationdbi | 1.26.0 | GNU R package “Annotation Database Interface” |
r-bioc-biobase | 2.28.0 | GNU R package “Biobase: Base functions for Bioconductor” |
r-bioc-biocgenerics | 0.14.0 | GNU R package “S4 generic functions for Bioconductor” |
r-bioc-biocinstaller | 1.18.4 | GNU R package “Install/Update Bioconductor and CRAN |
r-bioc-biocparallel | 1.2.9 | GNU R package “Bioconductor facilities for parallel |
r-bioc-biomart | 2.18.0 | GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene) |
r-bioc-biostrings | 2.36.4 | GNU R package “String objects representing biological |
r-bioc-bitseq | 1.8.0 | Bioconductor package “Transcript expression inference and differential |
r-bioc-deseq | 1.16.0 | Differential gene expression analysis based on the -ve binomial distribn. |
r-bioc-edger | 3.6.2 | GNU R package “Empirical analysis of digital gene |
r-bioc-genefilter | 1.46.1 | GNU R package “genefilter: methods for filtering genes |
r-bioc-geneplotter | 1.42.0 | Graphics related functions for Bioconductor |
r-bioc-genomeinfodb | 1.4.2 | GNU R package “Utilities for manipulating chromosome and |
r-bioc-genomicalignments | 1.4.1 | GNU R package “Representation and manipulation of short |
r-bioc-genomicranges | 1.20.6 | GNU R package “Representation and manipulation of genomic |
r-bioc-hilbertvis | 1.23.0 | GNU R package to visualise long vector data |
r-bioc-impute | 1.38.1 | GNU R package “impute: Imputation for microarray data” |
r-bioc-iranges | 2.2.7 | GNU R package “Infrastructure for manipulating intervals |
r-bioc-limma | 3.20.5 | GNU R package “Linear Models for Microarray Data” |
r-bioc-multtest | 2.24.0 | GNU R package “Resampling-based multiple hypothesis |
r-bioc-pcamethods | 1.54.0 | Bioconductor “pcaMethods: A collection of PCA methods.” |
r-bioc-preprocesscore | 1.30.0 | GNU R package “A collection of pre-processing functions” |
r-bioc-qvalue | 1:1.38.0 | Bioconductor package “Q-value estimation for false discovery rate control” |
r-bioc-rsamtools | 1.20.4 | GNU R package “Binary alignment (BAM), variant call (BCF), |
r-bioc-s4vectors | 0.6.5 | GNU R package “S4 implementation of vectors and lists” |
r-bioc-xvector | 0.8.0 | GNU R package “Representation and manpulation of external |
r-bioc-zlibbioc | 1.10.0 | GNU R package “An R packaged zlib-1.2.5” |
r-cran-abind | 1.4-0 | GNU R package “Combine multi-dimensional arrays” |
r-cran-ade4 | 1.7-2 | GNU R package “Analysis of Ecological Data : Exploratory |
r-cran-ape | 3.3 | GNU R package “Analyses of Phylogenetics and Evolution” |
r-cran-aplpack | 1.3.0 | GNU R package “Another Plot PACKage: stem.leaf, bagplot, |
r-cran-bitops | 1.0-6 | GNU R package implementing bitwise operations |
r-cran-catools | 1.17.1 | GNU R package “Tools: moving window statistics, GIF, |
r-cran-cluster | 2.0.3 | GNU R package for cluster analysis by Rousseeuw et al |
r-cran-data.table | 1.9.4 | GNU R package “Extension of data.frame” |
r-cran-dbi | 0.3.1 | GNU R package “R Database Interface” |
r-cran-dichromat | 2.0.0 | Color schemes for dichromats |
r-cran-digest | 0.6.8 | GNU R package “Create Cryptographic Hash Digests of R |
r-cran-evaluate | 0.7.2 | GNU R package “Parsing and Evaluation Tools that Provide |
r-cran-futile.logger | 1.4.1 | GNU R package “A Logging Utility for R” |
r-cran-futile.options | 1.0.0 | GNU R package “Futile options management” |
r-cran-gdata | 2.17.0 | GNU R package “Various R Programming Tools for Data |
r-cran-gee | 4.13-19 | GNU R package “Generalized Estimation Equation Solver” |
r-cran-getopt | 1.20.0 | GNU R package “C-like getopt behavior.” |
r-cran-ggplot2 | 1.0.1 | GNU R package “An Implementation of the Grammar of |
r-cran-gplots | 2.17.0 | GNU R package “Various R Programming Tools for Plotting |
r-cran-gtable | 0.1.2 | GNU R package “Arrange grobs in tables.” |
r-cran-gtools | 3.5.0 | GNU R package “Various R Programming Tools” |
r-cran-labeling | 0.3 | GNU R package “Axis Labeling” |
r-cran-lambda.r | 1.1.7 | GNU R package “Modeling Data with Functional Programming” |
r-cran-lattice | 0.20-29 | GNU R package “Lattice Graphics” |
r-cran-leaps | 2.9 | GNU R package “regression subset selection” |
r-cran-lme4 | 1.1-9 | GNU R package for linear mixed effects model fitting |
r-cran-locfit | 1.5-9.1 | Local Regression, Likelihood and Density Estimation. |
r-cran-matrix | 1.2-2 | GNU R package of classes for dense and sparse matrices |
r-cran-matrixstats | 0.10.0 | R package “Methods that apply to rows and columns of a matrix” |
r-cran-munsell | 0.4.2 | GNU R package “Munsell colour system” |
r-cran-nlme | 3.1.122 | GNU R package for (non-)linear mixed effects models |
r-cran-optparse | 1.2.0 | GNU R package “Command line option parser.” |
r-cran-permute | 0.8-4 | GNU R package “Functions for Generating Restricted |
r-cran-plotrix | 3.5-7 | GNU R package “Various plotting functions” |
r-cran-plyr | 1.8.3 | GNU R package “Tools for Splitting, Applying and Combining |
r-cran-prettyr | 2.0-8 | GNU R package “Pretty descriptive stats.” |
r-cran-propcis | 0.2-5 | GNU R package “PropCIs: Various confidence interval methods for proportions” |
r-cran-proto | 0.3-10 | GNU R package “Prototype object-based programming” |
r-cran-r.methodss3 | 1.6.1 | GNU R package “Utility function for defining S3 methods” |
r-cran-rapidr | 0.1.1 | GNU R package “RAPIDR: Reliable Accurate Prenatal non-Invasive Diagnosis.” |
r-cran-rcolorbrewer | 1.0-5 | GNU R package providing suitable color palettes |
r-cran-rcpp | 0.12.1 | GNU R package “Seamless R and C++ Integration” |
r-cran-rcurl | 1.95-4.7 | GNU R package “General Network (HTTP/FTP/…) Client |
r-cran-relimp | 1.0-4 | GNU R package “Relative Contribution of Effects in a |
r-cran-reshape2 | 1.4.1 | GNU R package “Flexibly Reshape Data: A Reboot of the |
r-cran-rggobi | 2.1.20 | GNU R package for the GGobi data visualization system |
r-cran-rgl | 0.95.1247 | GNU R package for three-dimensional visualisation using OpenGL |
r-cran-rgtk2 | 2.20.31 | GNU R binding for Gtk2 |
r-cran-rmpi | 0.6-5 | GNU R package interfacing MPI libraries for distributed computing |
r-cran-rserve | 1.7-3 | GNU R Rserve tcp/ip server and sample clients |
r-cran-rsqlite | 1.0.0 | GNU R package “SQLite Interface for R” |
r-cran-rwave | 2.4 | GNU R package “Time-Frequency Analysis of 1-D Signals” |
r-cran-samr | 2.0 | GNU R package “SAM: Significance Analysis of Microarrays” |
r-cran-scales | 0.3.0 | GNU R package “Scale Functions for Visualization” |
r-cran-scatterplot3d | 0.3-36 | GNU R package “3D Scatter Plot” |
r-cran-snowfall | 1.84-6 | GNU R package “Easier cluster computing (based on snow).” |
r-cran-sp | 1:1.1-0 | GNU R package “Classes and Methods for Spatial Data” |
r-cran-stringr | 1.0.0 | GNU R package “Simple, Consistent Wrappers for Common |
r-cran-tcltk2 | 1.2-9 | GNU R package “Tcl/Tk Additions” |
r-cran-testthat | 0.9.1 | GNU R package “Testthat code. Tools to make testing fun |
r-cran-vegan | 2.3-0 | GNU R package “Community Ecology Package” |
r-cran-waveslim | 1.7.5 | GNU R package “Basic wavelet routines for one-, two- and |
r-cran-wavethresh | 4.6.6 | GNU R package “Wavelets statistics and transforms.” |
r-cran-xml | 3.98-1.3 | GNU R package “Tools for Parsing and Generating XML Within |
r-cran-xtable | 1:1.7-3 | GNU R coerce data to LaTeX and HTML tables |
r-mathlib | 3.2.2 | GNU R standalone mathematics library |
r-recommended | 3.2.2 | GNU R collection of recommended packages [metapackage] |
rasmol | 2.7.5.2 | Visualize biological macromolecules |
raxml | 8.0.26 | Randomized Axelerated Maximum Likelihood of phylogenetic trees |
ray | 2.3.1 | parallel de novo genome assemblies of next-gen sequencing data |
ray-extra | 2.3.1 | Scripts and XSL sheets for post-processing for ray de novo assembler |
rbs-finder | 1.0 | A program to find Ribosomal binding sites. |
rdp-classifier | 2.10.2+dfsg | taxonomic assignment from next generation sequencing |
readseq | 1 | Conversion between sequence formats |
rsem | 1.2.22+dfsg | RNA-Seq by Expectation-Maximization |
sampledata | 20041011 | Sample data for Bio-Linux packages |
samtools | 0.1.19 | processing sequence alignments in SAM and BAM formats |
scythe | 0.993 | Bayesian adapter trimmer for nextgen sequence reads |
seaview | 1:4.4.2 | No description |
seqprep | 1.1 | tool for stripping adaptors and/or merging paired reads with overlap |
shared | 1.1 | Some shared files used by Bio-Linux |
sickle | 1.33 | windowed adaptive trimming tool for FASTQ files using quality |
sift | 4.0.3b | predicts if a substitution in a protein has a phenotypic effect |
sortmerna | 2.0 | tool for filtering, mapping and OTU-picking NGS reads |
splitstree | 4.12.6 | Analysis and visualisation tool for distance data from biological sequences |
sputnik-mononucleotide | 0.1+20101005 | Searches DNA sequence files in FASTA format for microsatellite repeats |
squint | 1.02 | Java-based multiple alignment program and editor |
ssake | 3.8.1 | genomics application for assembling millions of very short DNA sequences |
stacks | 1.34 | pipeline for building loci from short-read sequences |
stacks-web | 1.34 | web interface for displaying loci from short-read sequences |
staden | 2.0.0b10 | DNA sequence assembly (Gap4/Gap5), editing and analysis tools |
staden-common | 2.0.0b10 | Architecture independent files for Staden |
stars | 1.2a | STARS is an alternative interface to Staden. |
sumatra | 1.0.01 | fast and exact comparison and clustering of sequences |
swarm | 1.2.20 | robust and fast clustering method for amplicon-based studies |
t-coffee | 10.00.r1613 | Multiple Sequence Alignment |
tablet | 1.14.04.10 | Graphical viewer for next gen sequence assemblies and alignments |
taxinspector | 1.0b3 | Browser for entries in the NCBI taxonomy database |
tetra | 1.0b3 | tetranucleotide frequency calculator with GUI |
themes-v7 | 7.0 | Graphics, icons, wallpaper and desktop settings for Bio-Linux 7 |
themes-v8 | 8.0 | Graphics, icons, wallpaper and desktop settings for Bio-Linux 8 |
tophat | 2.1.0 | fast splice junction mapper for RNA-Seq reads |
trace2dbest | 3.14 | Processes trace files into dbEST submissions |
transdecoder | 2.0.1+dfsg | find coding regions within transcripts |
transterm-hp | 2.07 | Transterm finds rho-independent transcription terminators in bacterial genomes. |
transtermhp | 2.09 | find rho-independent transcription terminators in bacterial genomes |
tree-puzzle | 5.2 | Reconstruction of phylogenetic trees by maximum likelihood |
tree-puzzle-doc | 5.2 | Reconstruction of phylogenetic trees by maximum likelihood |
treeviewx | 0.5.1+20100823 | Displays and prints phylogenetic trees |
trinityrnaseq | 2.0.6+dfsg | RNA-Seq De novo Assembly |
trinityrnaseq-sampledata | 2.0.6+dfsg | RNA-Seq De novo Assembly |
trnascan | 1.23 | tRNAscan-SE searches for tRNA genes in genomic sequences. |
trnascan-se | 1.3.1 | search for tRNA genes in genomic sequences |
tutorials | 1 | Tutorials and documentation for Bio-Linux users. |
ugene | 1.18.0+repack | integrated bioinformatics toolkit |
unity-lens | 0.2 | unity lens for Bio-Linux |
usb-maker | 8.2 | Script to generate Bio-Linux live memory sticks. |
velvet | 1.2.10+dfsg | Nucleic acid sequence assembler for very short reads |
velvet-example | 1.2.10+dfsg | Example data for the Velvet sequence assembler |
velvet-long | 1.2.10+dfsg | Nucleic acid sequence assembler for very short reads, long version |
velvetoptimiser | 2.2.5 | Automatically optimise Velvet do novo assembly parameters |
vsearch | 1.1.1.nodata | tool for processing metagenomic sequences |
weblogo | 3.3 | create sequence logos from biological sequence alignments |
wise | 2.4.1 | comparison of biopolymers, commonly DNA and protein sequences |
xcut | 1.4.2 | A re-write of the GNU cut command with many new features. |
zsh | 1 | Z-Shell wrapper package for Bio-Linux. |
XVL Studio Standard
Equipped with a production preparation function that “visualizes” the assembly process in 3D
Product Summary
XVL Studio Standard is a production preparation tool equipped with functions to make the best use of XVL 3D data in the back-end process. In addition to basic functions, it has process verification and design change functions as standard.
Silo 2 5 6 x 2. Based on the 3D composition before dispatching from the design, consider the assembly order and workability in 3D, and link the information necessary for writing instructions to the 3D related to the assembly order , Software that is essential for XVL deployment.
XVL Studio Standard can utilize 3D data after process verification as an asset by using consistent data of XVL.
Target department
Design, trial production, production technology, manufacturing, etc.
Main function
Verification of assembly order
Design tree and manufacturing tree / process tree
XVL Studio Standard can create M-BOMs from 3D data separately from the design E-BOMs. If there is a production bill of material (M-BOM) managed by an external system, you can import it in a CSV file, or import / export M-BOMs defined in another XVL. In addition, you can define two BOMs, a production tree representing the M-BOM and a process tree representing the assembly sequence, all of which are managed in one XVL file.
*Can also be used as a decomposition tree that represents the decomposition order for service maintenance.
Design tree and manufacturing tree / process tree
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Examination of assembly order
In the process tree, you can examine the assembly order from 3D data. As well as being able to 'visualize' the process that had been considered in the mind of the veteran up to now in 3D and dynamically confirming the assembly of parts and parts, even if there is no actual machine, the assembly order is considered only with virtual models I can.
Examination of assembly order using 3D data
Verification of workability
Wolf responsive form maker 2 37 12 5. Based on the defined process tree, 3D human body model can be used to verify the workability of human beings, such as work perspective and posture in each assembly work. (This function is provided as an option . Please see the XVL Studio Option Human Option for details.)
Instruction book creation support
![Lattice Lattice](https://www.flandersscientific.com/lut-converter/img/open-cube.png)
Process snapshot
Work instructions and instruction diagrams can be registered in XVL based on process verification results and sequences. It enables efficient instruction creation by consolidating the functions necessary for creating instruction diagrams, such as batch creation of instruction notes, highlighting, and angle instruction diagrams. The registered information can be expanded as an instruction document such as Excel * using the XVL product.
*Instructions can be shared and viewed using Lattice3D Reporter, XVL Web Master, iXVL Series, XVL Player, and Lattice3D Reporter Viewer.
Creation of angle instruction
Assembly 3D animation
It is easy to generate 3D animations * in the completed assembly order. As a supplement to the instruction manual, complex instructions that are difficult to convey in sentences or images, such as overseas production plants, can be transmitted in an easy-to-understand manner using 3D animation.
*3D animation can also be output to movie files.
Generate assembly 3D animation from process tree
Dealing with design changes
Reflecting design changes
Only the relevant part of the 3D data where the design change has occurred can be replaced with the latest model. If you have already performed process review and work instruction editing, detection and reflection processing of design changes will be performed while maintaining the study and edit information. Since it is possible to respond to design changes even while editing, it enables front loading, such as starting process studies from the design stage.
Design change: after
Difference detection
Compare the shapes of two 3D data before and after the design change, and display the location with differences in a color map. By visually visualizing the changes, you can intuitively confirm the changes. (This function is provided as an option. For details, see XVL Studio Option Difference Detection Option.)
機能一覧
XVL Studio シリーズ機能一覧表です( 2018 年 10 月更新 )
機能 | XVL Studio Pro | XVL Studio Standard | XVL Studio Basic | |
---|---|---|---|---|
対応言語 | 対応言語 | 日本語・英語・ドイツ語・フランス語・韓国語 | ||
表示 | ビュー操作、ウォークスルー、フライスルー | ◯ | ◯ | ◯ |
表示精度変更 | ◯ | ◯ | ◯ | |
ワイヤーフレーム、隠線表示 | ◯ | ◯ | ◯ | |
アセンブリ構成表示、パート表示/非表示 | ◯ | ◯ | ◯ | |
全画面表示、クリッピング表示 | ◯ | ◯ | ◯ | |
マルチビュー、三面図表示 | ◯ | ◯ | ●(リスト編集 Opt.) | |
プロッタ実寸表示 | ◯ | × | × | |
編集 | アセンブリ構成編集、パート移動/回転、レイヤ編集 | ◯ | ◯ | ◯ |
パートプロパティ編集 | ◯ | ◯ | ◯ | |
マテリアル/テクスチャ/ライト編集 | ◯ | ◯ | ◯ | |
カメラ登録/反映 | ◯ | ◯ | ◯ | |
パート位置合わせ、自動分解、分解アニメ自動生成 | ◯ | ◯ | × | |
パーツリスト編集/入出力(CSV) | ◯ | ◯ | △(CSV 入出力のみ) | |
設計変更検出/反映 | ◯ | ◯ | ●(リスト編集 or イラスト作成 Opt.) | |
Microsoft Office への埋め込み | × | × | × | |
注記・寸法・計測 | 距離、角度、半径/直径、座標値 | ◯ | ◯ | ◯ |
表面積、体積、重心、慣性モーメント、投影面積 | ◯ | ◯ | ◯ | |
注記編集、補助点/補助線/簡易形状作成 | ◯ | ◯ | ◯ | |
アンダーカット検出 | ◯ | ◯ | ◯ | |
スナップショット・ 注釈ビュー | スナップショット登録/反映 | ◯ | ◯ | ◯ |
画像一括出力(BMP、JPEG、PNG、TIFF) | ◯ | ◯ | ◯ | |
注釈ビュー登録/反映、マークアップ作成 | ◯ | ◯ | ●(注釈ビュー Opt.) | |
断面 | 断面表示、断面線生成 | ◯ | ◯ | ◯ |
多方向断面生成 | ◯ | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | |
軌跡沿いの断面、リアルタイム 2D 断面/計測 | ◯ | × | × | |
断面線出力(IGES、DXF) | ◯ | × | × | |
干渉チェック | 総当り干渉、指定部品間干渉チェック | ◯ | ◯ | ◯ |
干渉部品一覧表示 | ◯ | ◯ | ◯ | |
干渉/接触/クリアランス箇所表示、干渉量計算、断面表示 | ◯ | × | × | |
干渉チェックレポート出力(Excel) | ◯ | × | × | |
オフセット形状生成 | ◯ | × | × | |
動的干渉チェック | 動的干渉チェック(部品移動時) | ◯ | ◯ | ◯ |
動的干渉チェック(アニメ再生時)、リアルタイム距離計算 | ◯ | × | × | |
形状差分検出 | 面単位差分検出 | ◯ | ◯ | ◯ |
差分検出リスト表示、差分カラーマップ表示 | ●(差分検出 Opt.) | ●(差分検出 Opt.) | ●(差分検出 Opt.) | |
ビジュアル形状比較、差分箇所抽出 | ●(差分検出 Opt.) | ●(差分検出 Opt.) | ●(差分検出 Opt.) | |
アニメーション | アニメーション定義 | ◯ | ◯ | × |
アニメーション再生 | ◯ | ◯ | × | |
工程 | 工程/製造ツリー編集 | ◯ | ◯ | × |
工程用自動分解、アニメ自動生成/編集 | ◯ | ◯ | × | |
工程ライブラリ、工程リスト編集/入出力(CSV) | ◯ | ◯ | × | |
バリエーション、工具/設備のインポート、アニメ編集 | ◯ | × | × | |
ヒューマン | 人体モデルのインポート、姿勢定義 | ●(ヒューマン Opt.) | ●(ヒューマン Opt.) | × |
部品吸着、主観ビュー | ●(ヒューマン Opt.) | ●(ヒューマン Opt.) | × | |
イラスト | 軌跡線作成 | ◯ | ◯ | ●(イラスト作成 Opt.) |
分解単位/順序設定、イラスト用自動分解、分解位置編集 | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | |
バルーン注記自動生成/編集 | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | |
イラスト用ファイル出力パラメータ設定 | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | ●(イラスト作成 Opt.) | |
入力ファイル | XVL(*.xv3、*.xv2、*.xv0) | ◯ | ◯ | ◯ |
VRML2、OBJ、STL、3DS、DWG/DXF、IGES、U3D、3D PDF | ◯ | ◯ | ◯ | |
CATIA V4、Parasolid、STEP | ●(各ファイル入力 Opt.) | ●(各ファイル入力 Opt.) | ●(各ファイル入力 Opt.) | |
出力ファイル | XVL(*.xv3、*.xv2、*.xv0) | ◯ | ◯ | ◯ |
VRML2、OBJ、STL、3DS、DWG/DXF、IGES、U3D、3D PDF | ◯ | ◯ | ◯ | |
画像ファイル(BMP、JPEG、PNG、TIFF) | ◯ | ◯ | ◯ | |
イラスト用ファイル(SVG、DXF、EPS、CGM) | ◯ | ◯ | ●(イラスト作成Opt.) | |
Web用コンテンツ用ファイル(HTML5) | ◯ | ◯ | × | |
2D図面用ファイル(DXF) | ◯ | × | × |
機能一覧を PDF でダウンロードできます
動作環境
XVL Studio シリーズは次の環境で動作します( リリース Ver.17.0 時点 )
32bit 版 | 64bit 版 | |
---|---|---|
OS | Windows 7 日本語版 Windows 7 x64 日本語版 Windows 8.1 日本語版 Windows 8.1 x64 日本語版 Windows 10 日本語版 Windows 10 x64 日本語版 | Windows 7 x64 日本語版 Windows 8.1 x64 日本語版 Windows 10 x64 日本語版 |
CPU | 1GHz の Intel または AMD CPU | Intel 64 対応の Intel または AMD64 対応の AMD CPU |
メモリ | 1GB | 2GB |
HDD | 700MB 以上の空き領域 |
- 各言語版の XVL 製品は対応する言語版の Windows 上でのみ動作します。ご利用の Windows の言語に対応している XVL 製品がない場合には英語版製品をご利用ください。
- 64 bit 版 Windows 環境では、XVL Studio 32 bit 版は 32 bit プログラムとして動作します。64 bit プログラムとして動作させる場合は XVL Studio 64 bit 版をご利用下さい。
- その他動作環境の詳細につきましては XVL 販売代理店またはラティス・テクノロジーにお問い合わせください。
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List of Functions
XVL Studio Series Function List (Updated October 2018)
function | XVL Studio Pro | XVL Studio Standard | XVL Studio Basic | |
---|---|---|---|---|
supported language | supported language | Japanese, English, German, French, Korean | ||
display | View operation, walk through, fly through | Moth | Moth | Moth |
Display accuracy change | Moth | Moth | Moth | |
Wire frame, hidden line display | Moth | Moth | Moth | |
Assembly configuration display, part display / non-display | Moth | Moth | Moth | |
Full screen display, clipping display | Moth | Moth | Moth | |
Multiview, three view display | Moth | Moth | ● (Edit list Opt.) | |
Plotter actual size display | Moth | × | × | |
Edit | Assembly configuration editing, part movement / rotation, layer editing | Moth | Moth | Moth |
Part property editing | Moth | Moth | Moth | |
Material / Texture / Light Editing | Moth | Moth | Moth | |
Camera registration / reflection | Moth | Moth | Moth | |
Part Alignment, Automatic Decomposition, Automatic Generation of Decomposition Animation | Moth | Moth | × | |
Parts list editing / input / output (CSV) | Moth | Moth | ((CSV input / output only) | |
Design change detection / reflection | Moth | Moth | ● (List edit or illustration creation Opt.) | |
Embed in Microsoft Office | × | × | × | |
Notes, dimensions, measurement | Distance, angle, radius / diameter, coordinate value | Moth | Moth | Moth |
Surface area, volume, center of gravity, moment of inertia, projected area | Moth | Moth | Moth | |
Note editing, auxiliary point / auxiliary line / simple shape creation | Moth | Moth | Moth | |
Undercut detection | Moth | Moth | Moth | |
Snapshot and annotation view | Snapshot registration / reflection | Moth | Moth | Moth |
Batch image output (BMP, JPEG, PNG, TIFF) | Moth | Moth | Moth | |
Annotation view registration / reflection, markup creation | Moth | Moth | ● (Annotation view Opt.) | |
cross section | Section display, section line generation | Moth | Moth | Moth |
Multidirectional section generation | Moth | ● (Illustration Opt.) | ● (Illustration Opt.) | |
Cross section along the trajectory, real-time 2D cross section / measurement | Moth | × | × | |
Cross section line output (IGES, DXF) | Moth | × | × | |
Interference check | Brute force interference, specified part interference check | Moth | Moth | Moth |
Interference parts list display | Moth | Moth | Moth | |
Interference / Contact / Clearance display, Interference calculation, Cross section display | Moth | × | × | |
Interference check report output (Excel) | Moth | × | × | |
Offset shape generation | Moth | × | × | |
Dynamic interference check | Dynamic interference check (when moving parts) | Moth | Moth | Moth |
Dynamic interference check (during animation playback), real-time distance calculation | Moth | × | × | |
Shape difference detection | Plane unit difference detection | Moth | Moth | Moth |
Difference detection list display, difference color map display | ● (Difference detection Opt.) | ● (Difference detection Opt.) | ● (Difference detection Opt.) | |
Visual shape comparison, difference location extraction | ● (Difference detection Opt.) | ● (Difference detection Opt.) | ● (Difference detection Opt.) | |
animation | Animation definition | Moth | Moth | × |
Animation playback | Moth | Moth | × | |
Process | Process / production tree editing | Moth | Moth | × |
Automatic decomposition for process, automatic generation / editing of animation | Moth | Moth | × | |
Process library, process list editing / input / output (CSV) | Moth | Moth | × | |
Variation, import of tools / equipment, animation editing | Moth | × | × | |
Human | Human body model import, posture definition | ● (Human Opt.) | ● (Human Opt.) | × |
Parts suction, subjective view | ● (Human Opt.) | ● (Human Opt.) | × | |
An illustration | Trace line creation | Moth | Moth | ● (Illustration Opt.) |
Disassembly unit / order setting, automatic disassembly for illustration, disassembly position editing | ● (Illustration Opt.) | ● (Illustration Opt.) | ● (Illustration Opt.) | |
Automatic balloon note generation / editing | ● (Illustration Opt.) | ● (Illustration Opt.) | ● (Illustration Opt.) | |
File output parameter setting for illustration | ● (Illustration Opt.) | ● (Illustration Opt.) | ● (Illustration Opt.) | |
Input file | XVL (* .xv3, * .xv2, * .xv0) | Moth | Moth | Moth |
VRML2, OBJ, STL, 3DS, DWG / DXF, IGES, U3D, 3D PDF | Moth | Moth | Moth | |
CATIA V4, Parasolid, STEP | ● (each file input Opt.) | ● (each file input Opt.) | ● (each file input Opt.) | |
Output file | XVL (* .xv3, * .xv2, * .xv0) | Moth | Moth | Moth |
VRML2, OBJ, STL, 3DS, DWG / DXF, IGES, U3D, 3D PDF | Moth | Moth | Moth | |
Image file (BMP, JPEG, PNG, TIFF) | Moth | Moth | Moth | |
Illustration file (SVG, DXF, EPS, CGM) | Moth | Moth | ● (Illustration Opt.) | |
Web Content File (HTML 5) | Moth | Moth | × | |
2D drawing file (DXF) | Moth | × | × |
Operating environment
XVL Studio series works in the following environment (as of release Ver. 17.0)
32 bit version | 64-bit version | |
---|---|---|
OS | Windows 7 Japanese version Windows 7 x64 Japanese version Windows 8.1 Japanese version Windows 8.1 x64 Japanese version Windows 10 Japanese version Windows 10 x64 Japanese version | Windows 7 x64 Japanese version Windows 8.1 x64 Japanese version Windows 10 x64 Japanese version |
CPU | 1 GHz Intel or AMD CPU | Intel 64 based Intel or AMD64 compatible AMD CPU |
memory | 1GB | 2GB |
HDD | 700 MB free space |
- Each language version of XVL product works only on the corresponding language version of Windows. If you do not have an XVL product that supports your Windows language, please use the English version.
- In the 64-bit version Windows environment, XVL Studio 32-bit version operates as a 32-bit program. Please use XVL Studio 64 bit version to operate as a 64 bit program.
- For other operating environment details, please contact your XVL reseller or Lattice Technology.
Product trial
By actually trying out the product, you can consider the usage image in business. If you would like a trial of XVL products, please feel free to contact us from the contact form.
Installation / Operation support service
Lattice Lut Editor And Viewer 1 8 10
In order to support customers considering product introduction and internal development, Lattice Technology offers various introduction and operation support services such as “Startup Support Service” and “Product Operation Training” after introduction. It is For details, please refer to 'Operation and Support Support Services'.
Case study
Hioki Electric
A foundation for manufacturing reform to CAD + 1
A foundation for manufacturing reform to CAD + 1
Mr. KCM
Application of CAD + 1 manufacturing support system to shipbuilding process
Application of CAD + 1 manufacturing support system to shipbuilding process
This product is configured XVL Solution
Lattice Lut Editor And Viewer 1 8 1080p
Prototype evaluation XVL solution
Assembly verification
Assembly verification
Manufacturing XVL Solution
Production instruction creation
Production instruction creation
Please feel free to contact us if you have any questions or requests for information.